# Mathematics Colloquia and Seminars

Series | Organizer | ||
---|---|---|---|

PDE and Applied Math Seminar | J. Hunter (F), S. Shkoller (W), K. Luli (S) | Past | Future |

Algebra & Discrete Mathematics | E. Babson (W), C. O'Neill (S), M. Vazirani (F) | Past | Future |

Algebraic Geometry | G. Kuperberg (S), E. Carlsson (W), E. Gorskiy (F) | Past | Future |

Geometry/Topology | A. Jacob (F), J. Schultens (W), C. Even Zohar (S), M. Trnkova (S) | Past | Future |

Mathematical Biology | M. Vazquez (F), R. Guy (W), S. Walcott (S) | Past | Future |

Mathematical Physics & Probability | C. Tracy (F), P. Koroteev (W), B. Nachtergaele (S) | Past | Future |

Optimization | (Special topics only) | Past | Future |

QMAP Seminar | A. Waldron (F), T. Dimofte (W), A. Schwarz (S) | Past | Future |

Colloquium | J. De Loera, J. Hunter, M. Luu | Past | Future |

GGAM Colloquium | Past | Future | |

Distinguished Lecture Series | J. De Loera, J. Hunter, M. Luu | Past | Future |

Student-Run Applied & Math Seminar | J. Shu, D. Weber | Past | Future |

Student-Run Geometry/Topology Seminar | M. Ponce | Past | Future |

Student-Run Algebraic Geometry Seminar | O. Kivinen, P. Kshirsagar | Past | Future |

Student-Run Optimization and Variational Analysis | Past | Future | |

Featured Campus Seminars | Past | Future | |

Special Events | Past | Future |

### Past Talks

MSB 2112 | Mathematical Biology | Tom Chartrand, UC Davis |

Mon, Jun 11 2018, 3:10PM | Ph.D. Exit Seminar: The role of subthreshold phenomena in synchronization by electrical synapses | |

MSB 2112 | Mathematical Biology | Steffen Docken, UC Davis |

Mon, Jun 4 2018, 3:10PM | Ph.D. Exit Seminar: Mechanisms underlying effects of ion channel blockers on cardiac arrhythmias | |

MSB 2112 | Mathematical Biology | Madhusudhan Venkadesan, Yale University |

Mon, May 21 2018, 3:10PM | Geometry and mechanics of feet and fins | |

MSB 2112 | Mathematical Biology | Owen Lewis, University of Utah |

Mon, Apr 23 2018, 3:10PM | Gel mechanics and electrodiffusion: Maintenance of the gastric mucus layer | |

MSB 2112 | Mathematical Biology | Shilpa Khatri, UC Merced |

Mon, Apr 9 2018, 3:10PM | Fluid-structure interactions: Applications to marine biology | |

MSB 2112 | Mathematical Biology | Arvind Gopinath, UC Merced |

Mon, Mar 19 2018, 3:10PM | Buckling instabilities in thin filaments animated by active follower forces | |

Student Community Center Multipurpose Room | Mathematical Biology | Leah Edelstein Keshet, University of British Columbia |

Mon, Mar 12 2018, 4:10PM | Storer Lectureship | |

MSB 2112 | Mathematical Biology | Tom Chartrand, UC Davis |

Mon, Feb 26 2018, 3:10PM | Synchronization of electrically coupled resonate-and-fire neurons | |

MSB 2112 | Mathematical Biology | Sean Sun, Johns Hopkins University |

Fri, Feb 16 2018, 3:10PM | Cell Tension and Mechanical Regulation of Cell Growth and Volume | |

MSB 2112 | Mathematical Biology | Alan Hastings, UC Davis |

Mon, Feb 12 2018, 3:10PM | Dynamics and control of spatial ecological populations | |

MSB 2112 | Mathematical Biology | Javier Arsuaga, UC Davis |

Mon, Jan 29 2018, 3:10PM | Using random knot theory to analyze Chromosome Conformation Capture data | |

MSB 2112 | Mathematical Biology | Tanya Kostova, Lawrence Livermore National Lab |

Mon, Dec 4 2017, 3:10PM | Mechanistic simulation modeling of RNA virus evolution during serial passage in cell culture | |

MSB 2112 | Mathematical Biology | Allison Moore, Mathematics, UC Davis |

Mon, Nov 27 2017, 3:10PM | Site-specific recombination on circular DNA molecules and band surgery along the trefoil knot | |

MSB 2112 | Mathematical Biology | Nataša Jonoska, University of South Florida |

Mon, Nov 20 2017, 3:10PM | Detecting remarkable complexities and Russian-doll chromosomal nesting in a scrambled genome | |

MSB 2112 | Mathematical Biology | Christine Heitsch, Georgia Tech |

Mon, Nov 6 2017, 3:10PM | The combinatorics of RNA branching | |

MSB 2112 | Mathematical Biology | Sean Collins, Microbiology and Molecular Genetics, UC Davis |

Mon, Oct 30 2017, 3:10PM | Understanding how immune cells find their way: breaking down molecular measurement of spatial differences | |

MSB 2112 | Mathematical Biology | Sam Walcott, UC Davis Mathematics Department |

Mon, Oct 23 2017, 3:10PM | 3D model of myosin Va transporting fluid vesicles through actin intersections. | |

MSB 2112 | Mathematical Biology | Tim Hanks, Center for Neuroscience, UC Davis |

Tue, Oct 17 2017, 12:30PM | Model-based approaches for distinguishing neural contributions to decision making | |

MSB 2112 | Mathematical Biology | Mitch Sutter, Center for Neuroscience, UC Davis |

Tue, Oct 17 2017, 12:00PM | Dynamic coding in auditory cortex | |

Mathematical Sciences Building 2112 | Mathematical Biology | Will Debello, Center for Neuroscience, UC Davis |

Tue, Oct 10 2017, 12:30PM | Multiscale reconstruction of a learning circuit | |

Mathematical Sciences Building 2112 | Mathematical Biology | Karen Zito, Center for Neuroscience, UC Davis |

Tue, Oct 10 2017, 12:00PM | Sculpting the nervous system: Cellular and molecular mechanisms of neural circuit refinement | |

MSB 2112 | Mathematical Biology | Michael Savageau, Biomedical Engineering and Microbiology & Molecular Genetics, UC Davis |

Mon, Oct 2 2017, 3:10PM | A Phenotype-Centric Modeling Strategy for Complex Biochemical Systems | |

MSB 1147 | Mathematical Biology | Calina Copos, UC Davis |

Mon, Jun 5 2017, 3:10PM | Ph.D. Exit Seminar: Modeling the mechanics of cell locomotion: the effects of cell-surface interaction and cytoskeleton | |

MSB 2112 | Mathematical Biology | Frank Hilker, Osnabrück University |

Mon, May 22 2017, 3:10PM | Predator-prey models with group cooperation and disease transmission | |

MSB 2112 | Mathematical Biology | Nathan Kutz, University of Washington |

Mon, May 15 2017, 3:10PM | Data-driven discovery of governing equations in the engineering, physical and biological sciences | |

MSB 1147 | Mathematical Biology | Chuanbin Li, UC Davis |

Mon, May 8 2017, 3:10PM | Ph.D. Exit Seminar: Flagellar swimming in viscoelastic fluids: Role of fluid elastic stress revealed by simulations based on experimental data | |

MSB 2112 | Mathematical Biology | Mark Alber, UC Riverside |

Mon, Apr 24 2017, 3:10PM | Coupled multi-scale modeling and experimental studies of blood clot formation and epithelial cells proliferation | |

MSB 2112 | Mathematical Biology | Calvin Zhang, University of Arizona |

Mon, Apr 10 2017, 3:10PM | Random is Better: Stochastic Vesicle Release in Synaptic | |

MSB 2112 | Mathematical Biology | Leighton Izu |

Mon, Mar 13 2017, 3:10PM | Optimal Variability | |

MSB 2112 | Mathematical Biology | Sebastian Schreiber, UC Davis Ecology |

Mon, Feb 27 2017, 3:10PM | Saving Species and Combating Invasions with Integral Operators | |

MSB 2112 | Mathematical Biology | Andrew Sornborger, UC Davis Math |

Mon, Feb 6 2017, 3:10PM | Cusp Catastrophes and Information Processing with Neural Assemblies | |

2112 MSB | Mathematical Biology | Eric Jonas, Berkeley |

Mon, Jan 30 2017, 3:10PM | Could a Neuroscientist Understand a Microprocessor? | |

2112 MSB | Mathematical Biology | Artur Luczak, University of Lethbridge |

Mon, Jan 23 2017, 3:10PM | Neuronal Activity Packets as Basic Units of Neuronal Code | |

MSB 2112 | Mathematical Biology | Mariel Vazquez, Math Dept., UC Davis |

Mon, Nov 28 2016, 3:10PM | Pathways of Unlinking by Local Reconnection | |

MSB 2112 | Mathematical Biology | Alan Hastings, UC Davis |

Mon, Nov 21 2016, 3:10PM | Challenges in developing mathematical tools for dealing with management of ecological systems | |

MSB 2112 | Mathematical Biology | Sabrina Leslie, Physics Dept., McGill University |

Mon, Nov 14 2016, 3:10PM | Single-molecule visualization of topology-mediated dynamics in supercoiled DNA | |

MSB 2112 | Mathematical Biology | Ruth Davidson, Math Dept., UIUC |

Mon, Oct 31 2016, 3:10PM | Euclidean Geometry of Phylogenetic Methods and Data | |

MSB 2112 | Mathematical Biology | Patrice Koehl, CS Dept., UC Davis |

Mon, Oct 24 2016, 3:10PM | Complementarity of Physics, Informatics and Mathematics to study the Dynamics of Biological Systems | |

MSB 2112 | Mathematical Biology | Mark Goldman, NPB Dept., UC Davis |

Mon, Oct 10 2016, 3:10PM | How Neurons Do Integrals | |

MSB 2112 | Mathematical Biology | Blerta Shtylla, Pomona College |

Mon, Mar 14 2016, 3:10PM | Mathematical models of force generation and measurement in dividing cells | |

MSB 2112 | Mathematical Biology | On Shun Pak, Santa Clara University |

Mon, Mar 7 2016, 3:10PM | Living a Complex Life at Low Reynolds Number | |

MSB 2112 | Mathematical Biology | Daniel DeWoskin, UC Davis |

Mon, Feb 29 2016, 3:10PM | Multiscale modeling of the mammalian circadian clock | |

MSB 2112 | Mathematical Biology | Sook Lim, University of Cincinnati |

Fri, Feb 19 2016, 4:10PM | Modeling hydrodynamic interaction of filamentous structures | |

MSB 2112 | Mathematical Biology | Calina Copos, UC Davis |

Mon, Feb 1 2016, 3:10PM | Mechanical insights into the adhesion dynamics of amoeboid cells | |

MSB 2112 | Mathematical Biology | Sam Walcott, UC Davis |

Mon, Jan 11 2016, 4:10PM | Modeling the coupling between molecules that occurs during muscle contraction | |

MSB 1147 | Mathematical Biology | David Dynerman, UC Berkeley |

Tue, Dec 1 2015, 3:10PM | Studying continuous conformational changes of proteins using cryo-EM | |

MSB 2112 | Mathematical Biology | Sean Collins, Microbiology and Molecular Genetics, UC Davis |

Mon, Nov 23 2015, 2:10PM | G-proteins and directional sensing in neutrophil chemotaxis | |

MSB 2112 | Mathematical Biology | Yuanan Diao, UNC Charlotte |

Mon, Nov 9 2015, 2:10PM | The Topological Structure of the Mitochondrial DNA from Trypanosomes | |

MSB 2112 | Mathematical Biology | Hao Wang, Mathematical and Statistical Sciences, University of Alberta |

Mon, Nov 2 2015, 2:10PM | Environmental toxin-mediated predator–prey dynamics | |

MSB 2112 | Mathematical Biology | Tim Lewis, Mathematics Department, UC Davis |

Mon, Oct 26 2015, 2:10PM | Limb Coordination in Crustacean Swimming: The Neural Mechanisms and Mechanical Implications | |

MSB 2112 | Mathematical Biology | Bob Guy, Mathematics Department, UC Davis |

Mon, Oct 12 2015, 2:10PM | Cytoplasm rheology and its role cellular blebbing dynamics | |

MSB 2112 | Mathematical Biology | Andrew R. Francis, School of Computing, Engineering and Mathematics |

Mon, Oct 5 2015, 2:10PM | Affine symmetric groups, coloured diagram algebras and bacterial genome evolution. | |

MSB 2112 | Mathematical Biology | Kiho Cho, UC Davis |

Mon, May 18 2015, 3:10PM | Inherent and Acquired Genome Information Systems: Specificity and Dynamicity of Individual Life Forms | |

MSB 2112 | Mathematical Biology | Monica Nicolau, Stanford |

Mon, May 11 2015, 3:10PM | The topology and geometry of the complex networks underlying big data | |

MSB 2112 | Mathematical Biology | Jun Allard, UC Irvine |

Mon, May 4 2015, 3:10PM | A non-local Maxwell condition for mechano-chemical traveling waves in cells, or: A mathematical model of cell membrane-cortex with cortical healing elucidates bleb circus movement | |

MSB 2112 | Mathematical Biology | Swati Patel, UC Davis |

Mon, Apr 27 2015, 3:10PM | Community dynamics with eco-evolutionary feedbacks | |

MSB 2112 | Mathematical Biology | Javier Arsuaga, UC Davis |

Mon, Apr 20 2015, 3:10PM | Identification of Copy Number Aberrations in Breast Cancer Subtypes using Persistence Topology | |

MSB 2112 | Mathematical Biology | Roberto Zenit, Instituto de Investigaciones en Materiales Universidad Nacional Autonoma de Mexico |

Mon, Apr 6 2015, 3:10PM | Locomotion of microorganisms in complex fluids | |

MSB 2112 | Mathematical Biology | Arvind Gopinath, Haverford College |

Mon, Mar 30 2015, 3:10PM | Getting Stuck: Kinetics, Elastohydrodynamics, and Soft Adhesion | |

MSB 2112 | Mathematical Biology | Sylvain Costes, Life Sciences Division, Lawrence Berkeley National Laboratory and Exogen Biotechnology |

Mon, Mar 16 2015, 3:10PM | Predicting cancer risk from earth and space radiation using DNA damage clustering phenotype | |

MSB 2112 | Mathematical Biology | Becca Thomases, Mathematics Department, UC Davis |

Mon, Mar 9 2015, 3:10PM | Microorganism locomotion in viscoelastic fluids | |

MSB 2112 | Mathematical Biology | Mark Segal, UCSF Department of Epidemiology and Biostatistics |

Mon, Mar 2 2015, 3:10PM | 3D Genome Reconstruction: How and Why | |

MSB 2112 | Mathematical Biology | Massa Shoura, Stanford University |

Mon, Feb 23 2015, 3:10PM | Keeping You in the Loop: The mechanics of DNA shape and flexibility in site-specific recombination. | |

MSB 2112 | Mathematical Biology | Boris Faybishenko, Lawrence Berkeley National Laboratory |

Mon, Feb 9 2015, 3:10PM | The Emergence of Chaotic Dynamics in Complex Microbial Systems: 1D Modeling and Perspectives | |

MSB 2112 | Mathematical Biology | Paul Pease, Microbiology and Molecular Genetics, UC Davis |

Mon, Feb 2 2015, 3:10PM | Correlating DNA sequence with the formation of Z-DNA: insights gained from single molecule experiments | |

MSB 2112 | Mathematical Biology | |

Mon, Jan 26 2015, 3:10PM | CANCELLED | |

MSB 2112 | Mathematical Biology | Andy Ruina, Mechanical Engineering, Cornell University |

Mon, Jan 5 2015, 3:10PM | Gliders, bicycles, toys and walking robots | |

MSB 3106 | Mathematical Biology | Daniel DeWoskin, University of Michigan |

Mon, Jan 5 2015, 11:00AM | Fast and Slow Coupling in the Circadian Clock | |

MSB 1147 | Mathematical Biology | Andrew Sornborger, UC Davis, Mathematics |

Mon, Dec 8 2014, 3:10PM | A Unified Framework for Information Coding in the Brain: Memory, Oscillations and Zombie Modes | |

MSB 1147 | Mathematical Biology | Alan Hastings, UC Davis, Environmental Science and Policy |

Mon, Nov 24 2014, 3:10PM | Early Warning Signs and Critical Transitions in Ecology: Corals, Theory, Pitfalls, and Advances | |

MSB 1147 | Mathematical Biology | Eva Kanso, University of Southern California |

Mon, Nov 17 2014, 3:10PM | Stable Hovering is Not Efficient | |

MSB 1147 | Mathematical Biology | Tom Chou, UCLA |

Mon, Nov 3 2014, 3:10PM | Enumeration and first passage times in self-assembly | |

MSB 1147 | Mathematical Biology | De Witt Sumners, Florida State University |

Mon, Oct 27 2014, 3:10PM | Reconnection in biology and physics | |

MSB 1147 | Mathematical Biology | Dominique Duncan, UC Davis |

Mon, Oct 20 2014, 3:10PM | Nonlinear independent component analysis in neurological applications | |

MSB 1147 | Mathematical Biology | Adam Lampert, UC Davis, Environmental Science and Policy |

Mon, Oct 6 2014, 3:10PM | The role of space and stochasticity in ecosystem dynamics and management | |

MSB 2112 | Mathematical Biology | Lucy Spardy, Mathematical Biosciences Institute, Ohio State University |

Mon, May 19 2014, 3:10PM | A dynamical systems analysis of afferent control in a neuromechanical model of locomotion | |

MSB 2112 | Mathematical Biology | Max Donelan, Simon Fraser University |

Mon, May 12 2014, 3:10PM | Control of Energy Minimization in Human Locomotion | |

MSB 2112 | Mathematical Biology | Sharon Aviran, Biomedical Engineering, UC Davis |

Mon, May 5 2014, 3:10PM | Deciphering RNA structure from genomic big data and probabilistic models | |

MSB 2112 | Mathematical Biology | Grant Fiddyment, Boston Universtiy |

Mon, Apr 28 2014, 3:10PM | Point process analysis of human seizures | |

MSB 2112 | Mathematical Biology | Colleen Clancy, Dept. of Pharmacology, UC Davis |

Mon, Apr 21 2014, 3:10PM | Modeling and Simulation for Therapeutics | |

MSB 2112 | Mathematical Biology | Sam Walcott, Dept. of Mathematics, UC Davis |

Mon, Apr 14 2014, 3:10PM | Using math to understand muscle physiology from molecule to cell | |

MSB 2112 | Mathematical Biology | Helen Moore, Pharsight Corporation / Certera |

Mon, Apr 7 2014, 3:10PM | Mathematics in Drug Development | |

MSB 2112 | Mathematical Biology | Dietmar Oelz, UC Davis |

Mon, Mar 10 2014, 3:10PM | Modeling and Simulation of Cytokinesis Ring Constriction | |

MSB 2112 | Mathematical Biology | John Albeck, UC Davis |

Mon, Feb 10 2014, 3:10PM | Using live-cell microscopy to understand information flow in kinase signaling networks | |

MSB 2112 | Mathematical Biology | Owen Lewis, UC Davis |

Mon, Jan 27 2014, 3:10PM | Hydrodynamic Contributions to Amoeboid Cell Motility | |

MSB 2112 | Mathematical Biology | Katherine St. John, City University of New York |

Mon, Dec 2 2013, 3:10PM | Computational Methods in Phylogenetics | |

MSB 2112 | Mathematical Biology | Kyle Wedgwood, University of Nottingham, UK |

Mon, Nov 25 2013, 3:10PM | Non-smooth dynamics in spiking neural models | |

MSB 2112 | Mathematical Biology | Jun Song, UCSF |

Mon, Nov 18 2013, 3:10PM | Quantifying the Role of Steric Constraints in Nucleosome Positioning | |

MSB 3240 | Mathematical Biology | Suzanne S. Sindi, University of California - Merced |

Mon, Nov 4 2013, 3:10PM | Mathematical Modeling of Prion Protein Dynamics and Transmission in Yeast | |

MSB 2112 | Mathematical Biology | Daisuke Sato, Pharmacology, UC Davis |

Mon, Oct 14 2013, 3:10PM | Role of fluctuations and diffusion in the formation of spatially discordant alternans in cardiac tissue | |

MSB 2112 | Mathematical Biology | Michal Linial, Hebrew University of Jerusalem |

Mon, Sep 30 2013, 3:10PM | SHORT PROTEINS: THE PLAYGROUND OF EVOLUTION | |

MSB 2112 | Mathematical Biology | Erin Craig, UC Davis |

Mon, Jun 3 2013, 3:10PM | Model for integration of actin, myosin and adhesion dynamics in cell motility | |

MSB 1147 | Mathematical Biology | Farzan Nadim, NJIT/Rutgers |

Wed, May 29 2013, 4:10PM | Preferred frequencies and membrane potential resonance in an oscillatory network. | |

MSB 2112 | Mathematical Biology | Chuan Xue, Ohio State U |

Mon, May 20 2013, 3:10PM | Multiscale models of bacterial chemotaxis | |

MSB 2112 | Mathematical Biology | Jiawei (Calvin) Zhang, UC Davis |

Mon, May 13 2013, 3:10PM | Limb Coordination in Crustacean Swimming: the Underlying Neural and Fluid Dynamics | |

MSB 2112 | Mathematical Biology | Stephen Kowalczykowski, UC Davis |

Mon, Apr 15 2013, 3:10PM | Single Molecule Visualization of Protein-DNA Complexes: Watching Machines at Work | |

MSB 2112 | Mathematical Biology | Oded Farago, Ben Gurion University of the Negev |

Mon, Apr 8 2013, 3:10PM | Elasticity-mediated crosstalk between Myosin II motors | |

MSB 2112 | Mathematical Biology | Karin Leiderman, UC Merced |

Mon, Mar 18 2013, 3:10PM | The Influence of Hindered Protein Transport on the Development of Platelet Thrombi Under Flow | |

MSB 2112 | Mathematical Biology | Craig Benham, UC Davis |

Mon, Mar 11 2013, 3:10PM | Topologically Driven Structural Transitions in DNA - Their Analysis and Biological Roles | |

MSB 2112 | Mathematical Biology | Mohammad R. K. Mofrad, UC Berkeley |

Mon, Mar 4 2013, 3:10PM | Computational Models of Cell Mechanobiology, from Focal Adhesions to Nuclear Pores | |

MSB 2112 | Mathematical Biology | Tamon Stephen, Simon Fraser University |

Mon, Feb 11 2013, 3:10PM | Two pairs of boolean functions in biology | |

MSB 2112 | Mathematical Biology | KC Huang, Stanford University |

Mon, Feb 4 2013, 3:10PM | Computational modeling of bacterial growth | |

MSB 2112 | Mathematical Biology | Henry Fu, University of Nevada, Reno |

Mon, Jan 28 2013, 2:10PM | Biological and Artificial Microswimmers | |

MSB 2112 | Mathematical Biology | Laura Miller, University of North Carolina |

Mon, Jan 7 2013, 3:10PM | How do tubular hearts pump blood? | |

MSB 1147 | Mathematical Biology | Leor Weinberger, UCSF |

Mon, Dec 3 2012, 2:10PM | An Endogenous Accelerator for Viral Gene Expression Confers a Fitness Advantage | |

MSB 1147 | Mathematical Biology | Padmini Rangamani, UC Berkeley |

Mon, Nov 26 2012, 2:10PM | Cell shape, signaling and biomechanics: the plasma membrane as unifying concept | |

MSB 1147 | Mathematical Biology | Alex Mogilner, UC Davis |

Mon, Oct 29 2012, 2:10PM | Mathematical biology of motile cytoplasmic fragments | |

MSB 1147 | Mathematical Biology | Isaac Klapper, Temple University |

Mon, Oct 22 2012, 2:10PM | Modeling of Microbial Biofilm Communities | |

MSB 1147 | Mathematical Biology | Boris Rubinstein, Stowers Institute |

Mon, Oct 8 2012, 2:10PM | Mechanisms of actomyosin ring contraction for budding yeast cell division | |

MSB 3106 | Mathematical Biology | John Butcher, Keele University |

Thu, Jul 5 2012, 12:10PM | Reservoir Computing with high non-linear separation and long- term memory for time-series data analysis | |

MSB 2112 | Mathematical Biology | Josh Baker, University of Nevada |

Mon, Jun 4 2012, 3:10PM | SIMPLE MODELS OF MUSCLE CONTRACTION AND REGULATION | |

MSB 2112 | Mathematical Biology | Sam Walcott, UC Davis |

Mon, May 21 2012, 3:10PM | A modeler's perspective on muscle contraction | |

MSB 2112 | Mathematical Biology | Chris Rycroft, Berkeley |

Mon, May 7 2012, 3:10PM | Mechanical simulation of mammalian acini | |

MSB 2112 | Mathematical Biology | Steve Lehman, UC Berkeley |

Mon, Apr 30 2012, 3:10PM | Simple cross-bridge mechanics models and their incorporation into an actomyosin ATPase cycle | |

MSB 2112 | Mathematical Biology | Tom Powers, Brown University |

Mon, Apr 23 2012, 3:10PM | Mechanics of Swimming Microorganisms | |

MSB 2110 | Mathematical Biology | Christophe Eloy, Aix-Marseille University, France |

Mon, Apr 9 2012, 3:10PM | Fluid-structure interactions in biology: The size of trees and the shape of fish | |

MSB 2112 | Mathematical Biology | Yuan Lou, Ohio State U |

Mon, Mar 5 2012, 3:10PM | Dispersal strategies in patchy environments | |

MSB 2112 | Mathematical Biology | Zhilian Feng, Purdue University |

Mon, Feb 27 2012, 3:10PM | Plant toxins and trophic cascades alter fire regime and succession on a boreal forest landscape | |

MSB 2112 | Mathematical Biology | Alex Mogilner, UC Davis |

Mon, Feb 13 2012, 3:10PM | Kinetics, geometry and mechanics of mitotic spindle assembly | |

MSB 2112 | Mathematical Biology | Oleg Igoshin, Rice University |

Mon, Feb 6 2012, 3:10PM | Stochasticity and ultrasensitivity in bacterial networks | |

MSB 2112 | Mathematical Biology | German Enciso, UC Irvine |

Mon, Jan 30 2012, 3:10PM | Protein scaffolds can enhance the bistability of multisite phosphorylation systems | |

MSB 2112 | Mathematical Biology | Wanda Strychalski, UC Davis |

Mon, Nov 28 2011, 2:10PM | Computational explorations of cellular blebbing | |

MSB 2112 | Mathematical Biology | Kripa Gowrishankar, UC Davis |

Mon, Nov 14 2011, 2:10PM | Hydrodynamics of active polar filaments as a model of the cell cortex | |

MSB 2112 | Mathematical Biology | Andres Christen, CIMAT (Centro de Investigacion Matematica) |

Mon, Oct 31 2011, 2:10PM | Towards Uncertainty Quantification and Inference in the stochastic SIR Epidemic Model | |

MSB 2112 | Mathematical Biology | Frithjof Lutscher, University of Ottawa |

Mon, Oct 24 2011, 2:10PM | Integrodifference equations for invasive species in heterogeneous environments | |

MSB 2112 | Mathematical Biology | Mariel Vazquez, San Francisco State University |

Mon, Oct 10 2011, 2:10PM | DNA unknotting and unlinking | |

MSB 2112 | Mathematical Biology | Sam Walcott, UC Davis |

Mon, Oct 3 2011, 2:10PM | A simple model predicts many properties of the adhesions between a cell and a 2D surface | |

MSB 2112 | Mathematical Biology | Michael Schwemmer, Princeton University |

Tue, May 31 2011, 4:10PM | Rational Analysis of Task Switching | |

MSB 2112 | Mathematical Biology | Eric Shea-Brown, University of Washington |

Mon, May 9 2011, 3:10PM | Driven Elliptic Bursters -- Entrainment, Desynchrony, and Optimization | |

MSB 2112 | Mathematical Biology | Ilias Tagkopoulos, UC Davis (Computer Science) |

Mon, May 2 2011, 3:10PM | Microbial Evolution in Stressful Environments: Theory and Experiments | |

MSB 2112 | Mathematical Biology | Fritz Sommer, UC Berkeley |

Mon, Apr 18 2011, 3:10PM | Combining compressive sensing with learning: a theory how information is represented and communicated in the brain | |

Giedt Hall 1003 | Mathematical Biology | Stephen Ellner, Cornell University |

Thu, Apr 7 2011, 4:10AM | Rapid Evolution: Coupling Ecological and Evolutionary Dynamics | |

MSB 2112 | Mathematical Biology | Lev Truskinovsky, Centre National de la Recherche Scientifique and École Polytechnique |

Mon, Apr 4 2011, 3:10PM | Muscle contraction: a mechanical perspective | |

MSB 2112 | Mathematical Biology | Jianjun Paul Tian, College of William and Mary |

Mon, Mar 28 2011, 3:10PM | Mathematical Model for Germline Stem Cell Competition for Niche Occupancy | |

MSB 2112 | Mathematical Biology | Ajay Gopinathan, University of California, Merced |

Mon, Feb 28 2011, 3:10PM | Polymer Brushes and the Nuclear Pore: Implications for a Novel Form of Gated Transport | |

MSB 2112 | Mathematical Biology | Pavel Lushnikov, U New Mexico |

Mon, Feb 14 2011, 3:10PM | Regularization of collapse in cellular dynamics: connecting microscopic and macroscopic scales | |

MSB 2112 | Mathematical Biology | Alex Mogilner, UC Davis |

Mon, Feb 7 2011, 3:10PM | How to put together a CV, give a talk and get a job: lessons from recent math bio search | |

MSB 1147 | Mathematical Biology | Sam Walcott, Johns Hopkins University |

Mon, Jan 31 2011, 1:10PM | Solving problems in cell biology with simple molecular-mechanical models | |

MSB 2112 | Mathematical Biology | Richard Yamada, University of Michigan |

Thu, Jan 20 2011, 4:10PM | Mathematical Models of Transcription in Physiological Processes | |

MSB 1147 | Mathematical Biology | Cecilia Diniz Behn, University of Michigan |

Tue, Jan 18 2011, 4:10PM | Mathematical modeling of REM sleep regulation | |

MSB 2112 | Mathematical Biology | Jin Yu, UC Berkeley |

Thu, Jan 13 2011, 4:10PM | Modeling molecular machines in genetic process | |

MSB 1147 | Mathematical Biology | Marcus Roper, UC Berkeley |

Mon, Jan 10 2011, 1:10PM | Modeling microbial cooperation in challenging physical environments | |

MSB 2112 | Mathematical Biology | Jennifer Schwarz, Syracuse University |

Wed, Dec 1 2010, 3:10PM | Optimal orientation in branched cytoskeletal networks | |

MSB 2112 | Mathematical Biology | Andrew Oster, Ecole Normale Supérieure |

Mon, Nov 29 2010, 3:10PM | A model of VTA DA neuronal dynamics: A framework for studying nicotinic effects on burst firing | |

MSB 2112 | Mathematical Biology | Boyce Griffith, NYU School of Medicine |

Mon, Nov 15 2010, 3:10PM | Adaptive numerical methods and multiscale mathematical models in cardiology | |

MSB 2112 | Mathematical Biology | Juan Carlos del Alamo, UCSD, Mechanical and Aerospace Engineering |

Mon, Nov 8 2010, 3:10PM | Probing Cytoskeletal Mechanics in Cell Migration and Homeostasis | |

MSB 2112 | Mathematical Biology | Alan Hastings, UC Davis, Environmental Science and Policy |

Mon, Oct 18 2010, 3:10PM | Dynamics and control of spreading populations | |

MSB 2112 | Mathematical Biology | Lindsay Crowl Erickson, Sandia National Labs |

Mon, Oct 11 2010, 3:10PM | Understanding lateral platelet motion using a lattice Boltzmann-Immersed Boundary method | |

MSB 2112 | Mathematical Biology | Tamara Schlichter, UC Davis |

Mon, Sep 27 2010, 3:10PM | Modeling neural activity underlying phase constancy in the crayfish swimmeret system | |

MSB 2112 | Mathematical Biology | Jun Allard, University of British Columbia |

Mon, Jun 7 2010, 3:10PM | Spontaneous self-organization of cortical microtubule arrays in plants: from molecular to cellular scales | |

MSB 2112 | Mathematical Biology | Tyler Skorczewski, UC Davis |

Mon, May 24 2010, 3:10PM | Studying fish suction feeding using computational fluid dynamics | |

MSB 2112 | Mathematical Biology | Michael Famulare, Physics Department, University of Washington |

Mon, May 17 2010, 3:10PM | What does a spike encode? Deriving the code of a single neuron from the underlying dynamics | |

MSB 2112 | Mathematical Biology | Erin Craig, UC Davis |

Mon, May 10 2010, 3:10PM | Adhesion clutch and microtubule dynamics in nerve growth cone | |

MSB 2112 | Mathematical Biology | Julie Blackwood, UC Davis |

Thu, May 6 2010, 2:10PM | Management-based models in ecology | |

MSB 1147 | Mathematical Biology | Andrew Sornborger, University of Georgia |

Thu, Apr 29 2010, 12:00PM | Dimensionally-reduced visual cortical networks: implications for model reduction and experiment | |

MSB 2112 | Mathematical Biology | Tim Newman, Arizona State University |

Mon, Apr 26 2010, 3:10PM | Geometric order and movement patterns in embryonic epithelia: informing controversy using theory and computation | |

MSB 2112 | Mathematical Biology | Natalia Komarova, UC Irvine |

Mon, Apr 12 2010, 3:10PM | Stochastic modeling of drug treatment in cancer | |

Physics 432 | Mathematical Biology | Madan Rao, Raman Research Institute/National Centre for Biological Sciences, Bangalore, Ind |

Tue, Mar 9 2010, 2:00PM | Active Clustering, Fluctuations and Stresses in Living Cells | |

MSB 2112 | Mathematical Biology | Emmanuel de Langre, Department of Mechanics, Ecole Polytechnique |

Fri, Feb 26 2010, 2:10PM | Plant mechanical interactions with air and water | |

MSB 1147 | Mathematical Biology | Eric Lauga, University of California, San Diego |

Tue, Feb 23 2010, 4:10PM | Swimming on small scales: Physical and mathematical constraints | |

MSB 2112 | Mathematical Biology | Mike Schwemmer, UC Davis Math |

Mon, Feb 8 2010, 3:10PM | The Effects of Dendritic Properties on the Dynamics of Oscillatory Neurons | |

MSB 2112 | Mathematical Biology | Leighton Izu, UCD Pharmacology |

Mon, Feb 1 2010, 3:10PM | Linking Cellular Topography to Cellular Dynamics | |

MSB 2112 | Mathematical Biology | Laura Miller, University of North Carolina |

Mon, Jan 25 2010, 3:10PM | Combining mathematical modeling, numerical simulation, and experiment: A case study in tiny insect flight | |

MSB 1147 | Mathematical Biology | R.E. Lee Deville, University of Illinois, Urbana-Champaign |

Tue, Jan 12 2010, 4:10PM | Synchrony-breaking and Rare Events in Stochastic Neuronal Networks | |

MSB 2112 | Mathematical Biology | Dimitry Fisher, UC Davis, Center for Neuroscience |

Mon, Nov 23 2009, 3:10PM | Realistic modeling of recurrent interactions in a short-term memory network | |

MSB 2112 | Mathematical Biology | Aaron Fogelson, University of Utah |

Mon, Nov 16 2009, 3:10PM | Mathematical Approaches to Three Problems in Vascular Biology Related to Intravascular Blood Clotting | |

MSB 2112 | Mathematical Biology | Jie Zhu, UC Davis |

Mon, Nov 9 2009, 3:10PM | Mesoscopic Model of Actin-based Propulsions | |

MSB 2112 | Mathematical Biology | Pepe Puglisi, UCD Pharmacology |

Mon, Oct 19 2009, 3:10PM | Modeling Excitation-Contraction Coupling in a Rabbit Ventricular Myocyte | |

MSB 1147 | Mathematical Biology | Ernest Barreto, George Mason University, Department of Physics & Astronomy and The Krasnow Insti |

Thu, Oct 8 2009, 12:00PM | Ion Concentration Dynamics and Neuronal Excitability; Synchronization in Interacting Populations of Oscillators | |

MSB 1147 | Mathematical Biology | Saleet Jafri, George Mason University |

Tue, Jun 2 2009, 12:10PM | Advances in the Computational Modeling of Contraction in the Heart | |

MSB 1147 | Mathematical Biology | Bard Ermentrout, University of Pittsburgh |

Wed, May 27 2009, 3:10PM | A coupla ducks: slow currents, canards, clustering, and weak coupling | |

MSB 1147 | Mathematical Biology | William Ristenpart, UC Davis (Depts of Chem Eng & Food Sciences) |

Tue, May 19 2009, 12:10PM | Electrohydrodynamics and Epitrochoids: Dynamic Pattern Formation of Vesicles near Electrodes | |

MSB 1147 | Mathematical Biology | Kilian Koepsell, UC Berkeley |

Tue, May 12 2009, 12:10PM | Phase coupling estimation in coupled oscillator systems | |

MSB 1147 | Mathematical Biology | Lisa Fauci, Tulane University |

Sat, May 9 2009, 9:00AM | Understanding swimming at low Reynolds numbers: successes and challenges | |

MSB 1147 | Mathematical Biology | Jim Keener, University of Utah |

Fri, May 8 2009, 4:15PM | How cells make measurements | |

MSB 1147 | Mathematical Biology | Graham Coop, UC Davis (Evolution and Ecology ) |

Tue, Apr 28 2009, 12:10PM | A new method to identify loci underlying local adaptation | |

MSB 1147 | Mathematical Biology | Eva Strawbridge, UC Davis |

Tue, Apr 14 2009, 12:10PM | Mechanics, Dynamics, and Structures of DNA | |

MSB 1147 | Mathematical Biology | Bard Ermentrout, University of Pittsburgh |

Wed, Mar 11 2009, 3:10PM | CANCELED DUE TO ILLNESS (A coupla ducks: slow currents, canards, clustering, and weak coupling) | |

MSB 2112 | Mathematical Biology | Sukbin Lim, Courant Institute of Mathematical Sciences, New York University |

Thu, Feb 19 2009, 11:00AM | Noise-induced transitions in slow wave neuronal dynamics | |

MSB 2112 | Mathematical Biology | Jim Sanchirico, UC Davis (Environmental Science and Policy, GGAM) |

Tue, Feb 3 2009, 11:00AM | Economically Optimal Management of a Metapopulation | |

MSB 2112 | Mathematical Biology | Wanda Strychalski, University of North Carolina |

Thu, Jan 29 2009, 11:00AM | A Numerical Method to Investigate the Effects of Changing Cell Morphologies on Biochemical Signaling Networks | |

MSB 2112 | Mathematical Biology | Anael Verdugo, Cornell University |

Thu, Jan 15 2009, 11:00AM | Dynamics of a Gene Network Model with Time Delay | |

MSB 1147 | Mathematical Biology | Ed Munro, University of Washington |

Fri, Jan 9 2009, 12:00PM | Using agent-based models to explore the dynamics of cellular morphogenesis | |

MSB 2112 | Mathematical Biology | Kevin Lin, University of Arizona |

Tue, Jan 6 2009, 11:00AM | Reliability of Layered Neural Oscillator Networks | |

MSB 2112 | Mathematical Biology | Eric Cytrynbaum, University of British Columbia |

Tue, Nov 25 2008, 12:00PM | Force generation in bacterial cell division | |

MSB 2112 | Mathematical Biology | Utz-Uwe Haus, Universität Magdeburg, |

Mon, Nov 24 2008, 3:10PM | Computing knock out strategies in metabolic networks | |

MSB 2112 | Mathematical Biology | Leonor Saiz, Biomedical Engineering, UC Davis |

Tue, Nov 4 2008, 12:00AM | Modeling of biological networks | |

MSB 2112 | Mathematical Biology | Tom Michoel, VIB, Ghent University |

Thu, Oct 23 2008, 12:00PM | Identification of modules in biological networks | |

MSB 2112 | Mathematical Biology | Charles Wolgemuth, University of Connecticut Health Center |

Tue, Oct 21 2008, 12:00PM | The Shape and Dynamics of the Spirochetes | |

MSB 2112 | Mathematical Biology | Richard Gomulkiewicz, Washington State University |

Tue, Oct 7 2008, 12:00PM | Neutral Evolution of Multivariate Quantitative Traits | |

MSB 2112 | Mathematical Biology | Steve Mielke, Genome Center, UC Davis |

Mon, Jun 2 2008, 4:10PM | Brownian Dynamics of Superhelical DNA | |

MSB 2112 | Mathematical Biology | Patrice Koehl, Computer Science Dept., UC Davis |

Mon, May 19 2008, 4:10PM | Electrostatics for Biomolecules: Beyond Poisson-Boltzmann | |

MSB 2112 | Mathematical Biology | Eric Cytrynbaum, Mathematics Dept, Univ of British Columbia |

Mon, May 12 2008, 4:10PM | Modeling the Appearance of Oriented Arrays of Microtubules in Growing Plant Cells | |

MSB 2112 | Mathematical Biology | Mont Hubbard, Sports Biomechanics Lab, UC Davis |

Mon, Apr 21 2008, 4:10PM | Safe Ski Jump Landing Slope Design | |

MSB 2112 | Mathematical Biology | Emily Stone, Math Dept., University of Montana |

Mon, Apr 7 2008, 4:10PM | Detecting spill-over: A dynamical systems modeling approach to glutamatergic synaptic signaling | |

MSB 2112 | Mathematical Biology | Subhadip Raychaudhuri, UC Davis |

Mon, Mar 10 2008, 2:10PM | Simplified models of receptor-ligand binding and intracellular signaling systems | |

MSB 2112 | Mathematical Biology | Mark Goldman, UC Davis |

Mon, Feb 25 2008, 2:10PM | Memory without feedback or attractors in a neural integrator network | |

MSB 2112 | Mathematical Biology | Bori Mazzag, Humboldt State University |

Mon, Feb 11 2008, 2:10PM | A computational investigation of the localized calcium dynamics near a heterogeneous release site | |

MSB 2112 | Mathematical Biology | Nick Cogan, Florida State University |

Mon, Jan 28 2008, 2:10PM | Extending Boundary Integral Methods to Biofilm Dynamics | |

MSB 2112 | Mathematical Biology | Ryusuke Kon, UC Davis |

Mon, Jan 14 2008, 2:10PM | Periodic lottery competition models and competitive exclusion | |

MSB 2112 | Mathematical Biology | Tim Lewis, Math, UCD |

Mon, May 21 2007, 4:10PM | Phase-locking in electrically coupled networks of cortical neurons | |

MSB 3106 | Mathematical Biology | Soichiro Yamada, Department of Biomedical Engineering, UCD |

Mon, May 14 2007, 4:10PM | Self-organization of a microtubule network at the cell cortex: experiments and models | |

MSB 3106 | Mathematical Biology | Abdul Barakat, Engineering, UCD |

Mon, May 7 2007, 4:10PM | Vascular Endothelial Cell Responsiveness to Fluid Mechanical Forces - Mechanisms and Implications | |

MSB 3106 | Mathematical Biology | Peter Røgen, Department of Mathematics, Technical University of Denmark |

Mon, Apr 30 2007, 4:10PM | Description and classification of protein structures | |

MSB 3106 | Mathematical Biology | Alex Mogilner, NPB and Math, UCD |

Mon, Apr 9 2007, 4:10PM | Modeling symmetry breaking in actin networks | |

MSB 3106 | Mathematical Biology | Dr. James Crutchfield, Center for Computational Sciences and Engineering |

Mon, Mar 12 2007, 4:10PM | Objects that Make Objects: The Population Dynamics of Structural Complexity | |

MSB 3106 | Mathematical Biology | Jochen Ditterich, Neurosciences Center, UCD |

Mon, Dec 4 2006, 4:10PM | Neural and Computational Mechanisms of Decision Making | |

MSB 3106 | Mathematical Biology | Arpy and Miranda, Math Department, UCD |

Mon, Nov 27 2006, 4:10PM | Student Presentations | |

MSB 3106 | Mathematical Biology | Niels Jensen, Dept of Applied Science, UCD |

Mon, Nov 20 2006, 4:10PM | TBA | |

MSB 3106 | Mathematical Biology | Alan Hastings, Dept of Environmental Science, UCD |

Mon, Nov 13 2006, 4:10PM | Mathematical Issues in Persistence in Population Biology | |

MSB 3106 | Mathematical Biology | Steve Mielke, UC Davis Genome Center |

Mon, Nov 6 2006, 4:10PM | DNA Mechanics and Dynamics | |

MSB 3106 | Mathematical Biology | Richard Plant, Dept of Plant Science, UCD |

Mon, Oct 30 2006, 4:10PM | Spatial and Geostatistical Analysis of Agricultural Data | |

MSB 3106 | Mathematical Biology | Yun Song, Dept of Computer Science, UCD |

Mon, Oct 23 2006, 4:10PM | An Algebraic Approach to a Classical Problem in Population Genetics | |

MSB 3106 | Mathematical Biology | Bruce Rannala, Dept of Evolution and Ecology |

Mon, Oct 16 2006, 4:10PM | Inferring Speciation Times Under an Episodic Molecular Clock | |

MSB 1147 | Mathematical Biology | R.E. Lee Deville, Courant Institute of Mathematical Sciences |

Fri, Apr 14 2006, 4:10PM | Coherence in stochastic dynamical systems | |

Kerr 693 | Mathematical Biology | Kilian Koepsell, Redwood Neuroscience Institute, UC Berkeley |

Thu, Nov 3 2005, 4:10PM | Temporal coding in the early visual system: Does spike timing matter? | |

Kerr 693 | Mathematical Biology | Brian Mulloney, NPB, UC Davis |

Thu, Oct 27 2005, 4:10PM | Bursts of information: oscillations, coupled oscillators, and coordinated locomotion | |

MSB 2112 | Mathematical Biology | Sebastian Schreiber, UC Davis Ecology |

Wed, Dec 31 1969, 3:10PM | TBA |