Mathematics Colloquia and Seminars

SeriesOrganizer
PDE and Applied Math SeminarJ. Hunter (F), S. Shkoller (W), K. Luli (S)PastFuture
Algebra & Discrete MathematicsE. Babson (S), C. O'Neill (W), M. Vazirani (F)PastFuture
Algebraic GeometryG. Kuperberg (S), E. Carlsson (W), E. Gorskiy (F)PastFuture
Geometry/TopologyA. Jacob (F), J. Schultens (W), C. Even Zohar (S), M. Trnkova (S)PastFuture
Mathematical BiologyM. Vazquez (F), R. Guy (W), S. Walcott (S)PastFuture
Mathematical Physics & ProbabilityC. Tracy (F), P. Koroteev (W), B. Nachtergaele (S)PastFuture
Optimization(Special topics only)PastFuture
QMAP SeminarA. Waldron (F), T. Dimofte (W), A. Schwarz (S)PastFuture
ColloquiumJ. De Loera, J. Hunter, M. LuuPastFuture
GGAM ColloquiumPastFuture
Distinguished Lecture SeriesJ. De Loera, J. Hunter, M. LuuPastFuture
Student-Run Applied & Math SeminarJ. Shu, D. WeberPastFuture
Student-Run Geometry/Topology SeminarM. PoncePastFuture
Student-Run Algebraic Geometry SeminarO. Kivinen, P. KshirsagarPastFuture
Student-Run Optimization and Variational AnalysisPastFuture
Featured Campus SeminarsPastFuture
Special EventsPastFuture

Past Talks

MSB 2112Mathematical BiologyChristine Heitsch, Georgia Tech
Mon, Nov 6 2017, 3:10PMThe combinatorics of RNA branching
MSB 2112Mathematical BiologySean Collins, Microbiology and Molecular Genetics, UC Davis
Mon, Oct 30 2017, 3:10PMUnderstanding how immune cells find their way: breaking down molecular measurement of spatial differences
MSB 2112Mathematical BiologySam Walcott, UC Davis Mathematics Department
Mon, Oct 23 2017, 3:10PM3D model of myosin Va transporting fluid vesicles through actin intersections.
MSB 2112Mathematical BiologyTim Hanks, Center for Neuroscience, UC Davis
Tue, Oct 17 2017, 12:30PMModel-based approaches for distinguishing neural contributions to decision making
MSB 2112Mathematical BiologyMitch Sutter, Center for Neuroscience, UC Davis
Tue, Oct 17 2017, 12:00PMDynamic coding in auditory cortex
Mathematical Sciences Building 2112Mathematical BiologyWill Debello, Center for Neuroscience, UC Davis
Tue, Oct 10 2017, 12:30PMMultiscale reconstruction of a learning circuit
Mathematical Sciences Building 2112Mathematical BiologyKaren Zito, Center for Neuroscience, UC Davis
Tue, Oct 10 2017, 12:00PMSculpting the nervous system: Cellular and molecular mechanisms of neural circuit refinement
MSB 2112Mathematical BiologyMichael Savageau, Biomedical Engineering and Microbiology & Molecular Genetics, UC Davis
Mon, Oct 2 2017, 3:10PMA Phenotype-Centric Modeling Strategy for Complex Biochemical Systems
MSB 1147Mathematical BiologyCalina Copos, UC Davis
Mon, Jun 5 2017, 3:10PMPh.D. Exit Seminar: Modeling the mechanics of cell locomotion: the effects of cell-surface interaction and cytoskeleton
MSB 2112Mathematical BiologyFrank Hilker, Osnabrück University
Mon, May 22 2017, 3:10PMPredator-prey models with group cooperation and disease transmission
MSB 2112Mathematical BiologyNathan Kutz, University of Washington
Mon, May 15 2017, 3:10PMData-driven discovery of governing equations in the engineering, physical and biological sciences
MSB 1147Mathematical BiologyChuanbin Li, UC Davis
Mon, May 8 2017, 3:10PMPh.D. Exit Seminar: Flagellar swimming in viscoelastic fluids: Role of fluid elastic stress revealed by simulations based on experimental data
MSB 2112Mathematical BiologyMark Alber, UC Riverside
Mon, Apr 24 2017, 3:10PMCoupled multi-scale modeling and experimental studies of blood clot formation and epithelial cells proliferation
MSB 2112Mathematical BiologyCalvin Zhang, University of Arizona
Mon, Apr 10 2017, 3:10PMRandom is Better: Stochastic Vesicle Release in Synaptic
MSB 2112Mathematical BiologyLeighton Izu
Mon, Mar 13 2017, 3:10PMOptimal Variability
MSB 2112Mathematical BiologySebastian Schreiber, UC Davis Ecology
Mon, Feb 27 2017, 3:10PMSaving Species and Combating Invasions with Integral Operators
MSB 2112Mathematical BiologyAndrew Sornborger, UC Davis Math
Mon, Feb 6 2017, 3:10PMCusp Catastrophes and Information Processing with Neural Assemblies
2112 MSB Mathematical BiologyEric Jonas, Berkeley
Mon, Jan 30 2017, 3:10PMCould a Neuroscientist Understand a Microprocessor?
2112 MSB Mathematical BiologyArtur Luczak, University of Lethbridge
Mon, Jan 23 2017, 3:10PMNeuronal Activity Packets as Basic Units of Neuronal Code
MSB 2112Mathematical BiologyMariel Vazquez, Math Dept., UC Davis
Mon, Nov 28 2016, 3:10PMPathways of Unlinking by Local Reconnection
MSB 2112Mathematical BiologyAlan Hastings, UC Davis
Mon, Nov 21 2016, 3:10PMChallenges in developing mathematical tools for dealing with management of ecological systems
MSB 2112Mathematical BiologySabrina Leslie, Physics Dept., McGill University
Mon, Nov 14 2016, 3:10PMSingle-molecule visualization of topology-mediated dynamics in supercoiled DNA
MSB 2112Mathematical BiologyRuth Davidson, Math Dept., UIUC
Mon, Oct 31 2016, 3:10PMEuclidean Geometry of Phylogenetic Methods and Data
MSB 2112Mathematical BiologyPatrice Koehl, CS Dept., UC Davis
Mon, Oct 24 2016, 3:10PMComplementarity of Physics, Informatics and Mathematics to study the Dynamics of Biological Systems
MSB 2112Mathematical BiologyMark Goldman, NPB Dept., UC Davis
Mon, Oct 10 2016, 3:10PMHow Neurons Do Integrals
MSB 2112Mathematical BiologyBlerta Shtylla, Pomona College
Mon, Mar 14 2016, 3:10PMMathematical models of force generation and measurement in dividing cells
MSB 2112Mathematical BiologyOn Shun Pak, Santa Clara University
Mon, Mar 7 2016, 3:10PMLiving a Complex Life at Low Reynolds Number
MSB 2112Mathematical BiologyDaniel DeWoskin, UC Davis
Mon, Feb 29 2016, 3:10PMMultiscale modeling of the mammalian circadian clock
MSB 2112Mathematical BiologySook Lim, University of Cincinnati
Fri, Feb 19 2016, 4:10PMModeling hydrodynamic interaction of filamentous structures
MSB 2112Mathematical BiologyCalina Copos, UC Davis
Mon, Feb 1 2016, 3:10PMMechanical insights into the adhesion dynamics of amoeboid cells
MSB 2112Mathematical BiologySam Walcott, UC Davis
Mon, Jan 11 2016, 4:10PMModeling the coupling between molecules that occurs during muscle contraction
MSB 1147Mathematical BiologyDavid Dynerman, UC Berkeley
Tue, Dec 1 2015, 3:10PMStudying continuous conformational changes of proteins using cryo-EM
MSB 2112Mathematical BiologySean Collins, Microbiology and Molecular Genetics, UC Davis
Mon, Nov 23 2015, 2:10PMG-proteins and directional sensing in neutrophil chemotaxis
MSB 2112Mathematical BiologyYuanan Diao, UNC Charlotte
Mon, Nov 9 2015, 2:10PMThe Topological Structure of the Mitochondrial DNA from Trypanosomes
MSB 2112Mathematical BiologyHao Wang, Mathematical and Statistical Sciences, University of Alberta
Mon, Nov 2 2015, 2:10PMEnvironmental toxin-mediated predator–prey dynamics
MSB 2112Mathematical BiologyTim Lewis, Mathematics Department, UC Davis
Mon, Oct 26 2015, 2:10PMLimb Coordination in Crustacean Swimming: The Neural Mechanisms and Mechanical Implications
MSB 2112Mathematical BiologyBob Guy, Mathematics Department, UC Davis
Mon, Oct 12 2015, 2:10PMCytoplasm rheology and its role cellular blebbing dynamics
MSB 2112Mathematical BiologyAndrew R. Francis, School of Computing, Engineering and Mathematics
Mon, Oct 5 2015, 2:10PMAffine symmetric groups, coloured diagram algebras and bacterial genome evolution.
MSB 2112Mathematical BiologyKiho Cho, UC Davis
Mon, May 18 2015, 3:10PMInherent and Acquired Genome Information Systems: Specificity and Dynamicity of Individual Life Forms
MSB 2112Mathematical BiologyMonica Nicolau, Stanford
Mon, May 11 2015, 3:10PMThe topology and geometry of the complex networks underlying big data
MSB 2112Mathematical BiologyJun Allard, UC Irvine
Mon, May 4 2015, 3:10PMA non-local Maxwell condition for mechano-chemical traveling waves in cells, or: A mathematical model of cell membrane-cortex with cortical healing elucidates bleb circus movement
MSB 2112Mathematical BiologySwati Patel, UC Davis
Mon, Apr 27 2015, 3:10PMCommunity dynamics with eco-evolutionary feedbacks
MSB 2112Mathematical BiologyJavier Arsuaga, UC Davis
Mon, Apr 20 2015, 3:10PMIdentification of Copy Number Aberrations in Breast Cancer Subtypes using Persistence Topology
MSB 2112Mathematical BiologyRoberto Zenit, Instituto de Investigaciones en Materiales Universidad Nacional Autonoma de Mexico
Mon, Apr 6 2015, 3:10PMLocomotion of microorganisms in complex fluids
MSB 2112Mathematical BiologyArvind Gopinath, Haverford College
Mon, Mar 30 2015, 3:10PMGetting Stuck: Kinetics, Elastohydrodynamics, and Soft Adhesion
MSB 2112Mathematical BiologySylvain Costes, Life Sciences Division, Lawrence Berkeley National Laboratory and Exogen Biotechnology
Mon, Mar 16 2015, 3:10PMPredicting cancer risk from earth and space radiation using DNA damage clustering phenotype
MSB 2112Mathematical BiologyBecca Thomases, Mathematics Department, UC Davis
Mon, Mar 9 2015, 3:10PMMicroorganism locomotion in viscoelastic fluids
MSB 2112Mathematical BiologyMark Segal, UCSF Department of Epidemiology and Biostatistics
Mon, Mar 2 2015, 3:10PM3D Genome Reconstruction: How and Why
MSB 2112Mathematical BiologyMassa Shoura, Stanford University
Mon, Feb 23 2015, 3:10PMKeeping You in the Loop: The mechanics of DNA shape and flexibility in site-specific recombination.
MSB 2112Mathematical BiologyBoris Faybishenko, Lawrence Berkeley National Laboratory
Mon, Feb 9 2015, 3:10PMThe Emergence of Chaotic Dynamics in Complex Microbial Systems: 1D Modeling and Perspectives
MSB 2112Mathematical BiologyPaul Pease, Microbiology and Molecular Genetics, UC Davis
Mon, Feb 2 2015, 3:10PMCorrelating DNA sequence with the formation of Z-DNA: insights gained from single molecule experiments
MSB 2112Mathematical Biology
Mon, Jan 26 2015, 3:10PMCANCELLED
MSB 2112Mathematical BiologyAndy Ruina, Mechanical Engineering, Cornell University
Mon, Jan 5 2015, 3:10PMGliders, bicycles, toys and walking robots
MSB 3106Mathematical BiologyDaniel DeWoskin, University of Michigan
Mon, Jan 5 2015, 11:00AMFast and Slow Coupling in the Circadian Clock
MSB 1147Mathematical BiologyAndrew Sornborger, UC Davis, Mathematics
Mon, Dec 8 2014, 3:10PMA Unified Framework for Information Coding in the Brain: Memory, Oscillations and Zombie Modes
MSB 1147Mathematical BiologyAlan Hastings, UC Davis, Environmental Science and Policy
Mon, Nov 24 2014, 3:10PMEarly Warning Signs and Critical Transitions in Ecology: Corals, Theory, Pitfalls, and Advances
MSB 1147Mathematical BiologyEva Kanso, University of Southern California
Mon, Nov 17 2014, 3:10PMStable Hovering is Not Efficient
MSB 1147Mathematical BiologyTom Chou, UCLA
Mon, Nov 3 2014, 3:10PMEnumeration and first passage times in self-assembly
MSB 1147Mathematical BiologyDe Witt Sumners, Florida State University
Mon, Oct 27 2014, 3:10PMReconnection in biology and physics
MSB 1147Mathematical BiologyDominique Duncan, UC Davis
Mon, Oct 20 2014, 3:10PMNonlinear independent component analysis in neurological applications
MSB 1147Mathematical BiologyAdam Lampert, UC Davis, Environmental Science and Policy
Mon, Oct 6 2014, 3:10PMThe role of space and stochasticity in ecosystem dynamics and management
MSB 2112Mathematical BiologyLucy Spardy, Mathematical Biosciences Institute, Ohio State University
Mon, May 19 2014, 3:10PMA dynamical systems analysis of afferent control in a neuromechanical model of locomotion
MSB 2112Mathematical BiologyMax Donelan, Simon Fraser University
Mon, May 12 2014, 3:10PMControl of Energy Minimization in Human Locomotion
MSB 2112Mathematical BiologySharon Aviran, Biomedical Engineering, UC Davis
Mon, May 5 2014, 3:10PMDeciphering RNA structure from genomic big data and probabilistic models
MSB 2112Mathematical BiologyGrant Fiddyment, Boston Universtiy
Mon, Apr 28 2014, 3:10PMPoint process analysis of human seizures
MSB 2112Mathematical BiologyColleen Clancy, Dept. of Pharmacology, UC Davis
Mon, Apr 21 2014, 3:10PMModeling and Simulation for Therapeutics
MSB 2112Mathematical BiologySam Walcott, Dept. of Mathematics, UC Davis
Mon, Apr 14 2014, 3:10PMUsing math to understand muscle physiology from molecule to cell
MSB 2112Mathematical BiologyHelen Moore, Pharsight Corporation / Certera
Mon, Apr 7 2014, 3:10PMMathematics in Drug Development
MSB 2112Mathematical BiologyDietmar Oelz, UC Davis
Mon, Mar 10 2014, 3:10PMModeling and Simulation of Cytokinesis Ring Constriction
MSB 2112Mathematical BiologyJohn Albeck, UC Davis
Mon, Feb 10 2014, 3:10PMUsing live-cell microscopy to understand information flow in kinase signaling networks
MSB 2112Mathematical BiologyOwen Lewis, UC Davis
Mon, Jan 27 2014, 3:10PMHydrodynamic Contributions to Amoeboid Cell Motility
MSB 2112Mathematical BiologyKatherine St. John, City University of New York
Mon, Dec 2 2013, 3:10PMComputational Methods in Phylogenetics
MSB 2112Mathematical BiologyKyle Wedgwood, University of Nottingham, UK
Mon, Nov 25 2013, 3:10PMNon-smooth dynamics in spiking neural models
MSB 2112Mathematical BiologyJun Song, UCSF
Mon, Nov 18 2013, 3:10PMQuantifying the Role of Steric Constraints in Nucleosome Positioning
MSB 3240Mathematical BiologySuzanne S. Sindi, University of California - Merced
Mon, Nov 4 2013, 3:10PMMathematical Modeling of Prion Protein Dynamics and Transmission in Yeast
MSB 2112Mathematical BiologyDaisuke Sato, Pharmacology, UC Davis
Mon, Oct 14 2013, 3:10PMRole of fluctuations and diffusion in the formation of spatially discordant alternans in cardiac tissue
MSB 2112Mathematical BiologyMichal Linial, Hebrew University of Jerusalem
Mon, Sep 30 2013, 3:10PMSHORT PROTEINS: THE PLAYGROUND OF EVOLUTION
MSB 2112Mathematical BiologyErin Craig, UC Davis
Mon, Jun 3 2013, 3:10PMModel for integration of actin, myosin and adhesion dynamics in cell motility
MSB 1147Mathematical BiologyFarzan Nadim, NJIT/Rutgers
Wed, May 29 2013, 4:10PMPreferred frequencies and membrane potential resonance in an oscillatory network.
MSB 2112Mathematical BiologyChuan Xue, Ohio State U
Mon, May 20 2013, 3:10PMMultiscale models of bacterial chemotaxis
MSB 2112Mathematical BiologyJiawei (Calvin) Zhang, UC Davis
Mon, May 13 2013, 3:10PMLimb Coordination in Crustacean Swimming: the Underlying Neural and Fluid Dynamics
MSB 2112Mathematical BiologyStephen Kowalczykowski, UC Davis
Mon, Apr 15 2013, 3:10PMSingle Molecule Visualization of Protein-DNA Complexes: Watching Machines at Work
MSB 2112Mathematical BiologyOded Farago, Ben Gurion University of the Negev
Mon, Apr 8 2013, 3:10PMElasticity-mediated crosstalk between Myosin II motors
MSB 2112Mathematical BiologyKarin Leiderman, UC Merced
Mon, Mar 18 2013, 3:10PMThe Influence of Hindered Protein Transport on the Development of Platelet Thrombi Under Flow
MSB 2112Mathematical BiologyCraig Benham, UC Davis
Mon, Mar 11 2013, 3:10PMTopologically Driven Structural Transitions in DNA - Their Analysis and Biological Roles
MSB 2112Mathematical BiologyMohammad R. K. Mofrad, UC Berkeley
Mon, Mar 4 2013, 3:10PMComputational Models of Cell Mechanobiology, from Focal Adhesions to Nuclear Pores
MSB 2112Mathematical BiologyTamon Stephen, Simon Fraser University
Mon, Feb 11 2013, 3:10PMTwo pairs of boolean functions in biology
MSB 2112Mathematical BiologyKC Huang, Stanford University
Mon, Feb 4 2013, 3:10PMComputational modeling of bacterial growth
MSB 2112Mathematical BiologyHenry Fu, University of Nevada, Reno
Mon, Jan 28 2013, 2:10PMBiological and Artificial Microswimmers
MSB 2112Mathematical BiologyLaura Miller, University of North Carolina
Mon, Jan 7 2013, 3:10PMHow do tubular hearts pump blood?
MSB 1147Mathematical BiologyLeor Weinberger, UCSF
Mon, Dec 3 2012, 2:10PMAn Endogenous Accelerator for Viral Gene Expression Confers a Fitness Advantage
MSB 1147Mathematical BiologyPadmini Rangamani, UC Berkeley
Mon, Nov 26 2012, 2:10PMCell shape, signaling and biomechanics: the plasma membrane as unifying concept
MSB 1147Mathematical BiologyAlex Mogilner, UC Davis
Mon, Oct 29 2012, 2:10PMMathematical biology of motile cytoplasmic fragments
MSB 1147Mathematical BiologyIsaac Klapper, Temple University
Mon, Oct 22 2012, 2:10PMModeling of Microbial Biofilm Communities
MSB 1147Mathematical BiologyBoris Rubinstein, Stowers Institute
Mon, Oct 8 2012, 2:10PMMechanisms of actomyosin ring contraction for budding yeast cell division
MSB 3106Mathematical BiologyJohn Butcher, Keele University
Thu, Jul 5 2012, 12:10PMReservoir Computing with high non-­linear separation and long-­ term memory for time-­series data analysis
MSB 2112Mathematical BiologyJosh Baker, University of Nevada
Mon, Jun 4 2012, 3:10PMSIMPLE MODELS OF MUSCLE CONTRACTION AND REGULATION
MSB 2112Mathematical BiologySam Walcott, UC Davis
Mon, May 21 2012, 3:10PMA modeler's perspective on muscle contraction
MSB 2112Mathematical BiologyChris Rycroft, Berkeley
Mon, May 7 2012, 3:10PMMechanical simulation of mammalian acini
MSB 2112Mathematical BiologySteve Lehman, UC Berkeley
Mon, Apr 30 2012, 3:10PMSimple cross-bridge mechanics models and their incorporation into an actomyosin ATPase cycle
MSB 2112Mathematical BiologyTom Powers, Brown University
Mon, Apr 23 2012, 3:10PMMechanics of Swimming Microorganisms
MSB 2110Mathematical BiologyChristophe Eloy, Aix-Marseille University, France
Mon, Apr 9 2012, 3:10PMFluid-structure interactions in biology: The size of trees and the shape of fish
MSB 2112Mathematical BiologyYuan Lou, Ohio State U
Mon, Mar 5 2012, 3:10PMDispersal strategies in patchy environments
MSB 2112Mathematical BiologyZhilian Feng, Purdue University
Mon, Feb 27 2012, 3:10PMPlant toxins and trophic cascades alter fire regime and succession on a boreal forest landscape
MSB 2112Mathematical BiologyAlex Mogilner, UC Davis
Mon, Feb 13 2012, 3:10PMKinetics, geometry and mechanics of mitotic spindle assembly
MSB 2112Mathematical BiologyOleg Igoshin, Rice University
Mon, Feb 6 2012, 3:10PMStochasticity and ultrasensitivity in bacterial networks
MSB 2112Mathematical BiologyGerman Enciso, UC Irvine
Mon, Jan 30 2012, 3:10PMProtein scaffolds can enhance the bistability of multisite phosphorylation systems
MSB 2112Mathematical BiologyWanda Strychalski, UC Davis
Mon, Nov 28 2011, 2:10PMComputational explorations of cellular blebbing
MSB 2112Mathematical BiologyKripa Gowrishankar, UC Davis
Mon, Nov 14 2011, 2:10PMHydrodynamics of active polar filaments as a model of the cell cortex
MSB 2112Mathematical BiologyAndres Christen, CIMAT (Centro de Investigacion Matematica)
Mon, Oct 31 2011, 2:10PMTowards Uncertainty Quantification and Inference in the stochastic SIR Epidemic Model
MSB 2112Mathematical BiologyFrithjof Lutscher, University of Ottawa
Mon, Oct 24 2011, 2:10PMIntegrodifference equations for invasive species in heterogeneous environments
MSB 2112Mathematical BiologyMariel Vazquez, San Francisco State University
Mon, Oct 10 2011, 2:10PMDNA unknotting and unlinking
MSB 2112Mathematical BiologySam Walcott, UC Davis
Mon, Oct 3 2011, 2:10PMA simple model predicts many properties of the adhesions between a cell and a 2D surface
MSB 2112Mathematical BiologyMichael Schwemmer, Princeton University
Tue, May 31 2011, 4:10PMRational Analysis of Task Switching
MSB 2112Mathematical BiologyEric Shea-Brown, University of Washington
Mon, May 9 2011, 3:10PMDriven Elliptic Bursters -- Entrainment, Desynchrony, and Optimization
MSB 2112Mathematical BiologyIlias Tagkopoulos, UC Davis (Computer Science)
Mon, May 2 2011, 3:10PMMicrobial Evolution in Stressful Environments: Theory and Experiments
MSB 2112Mathematical BiologyFritz Sommer, UC Berkeley
Mon, Apr 18 2011, 3:10PMCombining compressive sensing with learning: a theory how information is represented and communicated in the brain
Giedt Hall 1003Mathematical BiologyStephen Ellner, Cornell University
Thu, Apr 7 2011, 4:10AMRapid Evolution: Coupling Ecological and Evolutionary Dynamics
MSB 2112Mathematical BiologyLev Truskinovsky, Centre National de la Recherche Scientifique and École Polytechnique
Mon, Apr 4 2011, 3:10PMMuscle contraction: a mechanical perspective
MSB 2112Mathematical BiologyJianjun Paul Tian, College of William and Mary
Mon, Mar 28 2011, 3:10PMMathematical Model for Germline Stem Cell Competition for Niche Occupancy
MSB 2112Mathematical BiologyAjay Gopinathan, University of California, Merced
Mon, Feb 28 2011, 3:10PMPolymer Brushes and the Nuclear Pore: Implications for a Novel Form of Gated Transport
MSB 2112Mathematical BiologyPavel Lushnikov, U New Mexico
Mon, Feb 14 2011, 3:10PMRegularization of collapse in cellular dynamics: connecting microscopic and macroscopic scales
MSB 2112Mathematical BiologyAlex Mogilner, UC Davis
Mon, Feb 7 2011, 3:10PMHow to put together a CV, give a talk and get a job: lessons from recent math bio search
MSB 1147Mathematical BiologySam Walcott, Johns Hopkins University
Mon, Jan 31 2011, 1:10PMSolving problems in cell biology with simple molecular-mechanical models
MSB 2112Mathematical BiologyRichard Yamada, University of Michigan
Thu, Jan 20 2011, 4:10PMMathematical Models of Transcription in Physiological Processes
MSB 1147Mathematical BiologyCecilia Diniz Behn, University of Michigan
Tue, Jan 18 2011, 4:10PMMathematical modeling of REM sleep regulation
MSB 2112Mathematical BiologyJin Yu, UC Berkeley
Thu, Jan 13 2011, 4:10PMModeling molecular machines in genetic process
MSB 1147Mathematical BiologyMarcus Roper, UC Berkeley
Mon, Jan 10 2011, 1:10PMModeling microbial cooperation in challenging physical environments
MSB 2112Mathematical BiologyJennifer Schwarz, Syracuse University
Wed, Dec 1 2010, 3:10PMOptimal orientation in branched cytoskeletal networks
MSB 2112Mathematical BiologyAndrew Oster, Ecole Normale Supérieure
Mon, Nov 29 2010, 3:10PM A model of VTA DA neuronal dynamics: A framework for studying nicotinic effects on burst firing
MSB 2112Mathematical BiologyBoyce Griffith, NYU School of Medicine
Mon, Nov 15 2010, 3:10PMAdaptive numerical methods and multiscale mathematical models in cardiology
MSB 2112Mathematical BiologyJuan Carlos del Alamo, UCSD, Mechanical and Aerospace Engineering
Mon, Nov 8 2010, 3:10PMProbing Cytoskeletal Mechanics in Cell Migration and Homeostasis
MSB 2112Mathematical BiologyAlan Hastings, UC Davis, Environmental Science and Policy
Mon, Oct 18 2010, 3:10PMDynamics and control of spreading populations
MSB 2112Mathematical BiologyLindsay Crowl Erickson, Sandia National Labs
Mon, Oct 11 2010, 3:10PMUnderstanding lateral platelet motion using a lattice Boltzmann-Immersed Boundary method
MSB 2112Mathematical BiologyTamara Schlichter, UC Davis
Mon, Sep 27 2010, 3:10PMModeling neural activity underlying phase constancy in the crayfish swimmeret system
MSB 2112Mathematical BiologyJun Allard, University of British Columbia
Mon, Jun 7 2010, 3:10PMSpontaneous self-organization of cortical microtubule arrays in plants: from molecular to cellular scales
MSB 2112Mathematical BiologyTyler Skorczewski, UC Davis
Mon, May 24 2010, 3:10PMStudying fish suction feeding using computational fluid dynamics
MSB 2112Mathematical BiologyMichael Famulare, Physics Department, University of Washington
Mon, May 17 2010, 3:10PMWhat does a spike encode? Deriving the code of a single neuron from the underlying dynamics
MSB 2112Mathematical BiologyErin Craig, UC Davis
Mon, May 10 2010, 3:10PMAdhesion clutch and microtubule dynamics in nerve growth cone
MSB 2112Mathematical BiologyJulie Blackwood, UC Davis
Thu, May 6 2010, 2:10PMManagement-based models in ecology
MSB 1147Mathematical BiologyAndrew Sornborger, University of Georgia
Thu, Apr 29 2010, 12:00PMDimensionally-reduced visual cortical networks: implications for model reduction and experiment
MSB 2112Mathematical BiologyTim Newman, Arizona State University
Mon, Apr 26 2010, 3:10PMGeometric order and movement patterns in embryonic epithelia: informing controversy using theory and computation
MSB 2112Mathematical BiologyNatalia Komarova, UC Irvine
Mon, Apr 12 2010, 3:10PMStochastic modeling of drug treatment in cancer
Physics 432Mathematical BiologyMadan Rao, Raman Research Institute/National Centre for Biological Sciences, Bangalore, Ind
Tue, Mar 9 2010, 2:00PMActive Clustering, Fluctuations and Stresses in Living Cells
MSB 2112Mathematical BiologyEmmanuel de Langre, Department of Mechanics, Ecole Polytechnique
Fri, Feb 26 2010, 2:10PMPlant mechanical interactions with air and water
MSB 1147Mathematical BiologyEric Lauga, University of California, San Diego
Tue, Feb 23 2010, 4:10PMSwimming on small scales: Physical and mathematical constraints
MSB 2112Mathematical BiologyMike Schwemmer, UC Davis Math
Mon, Feb 8 2010, 3:10PMThe Effects of Dendritic Properties on the Dynamics of Oscillatory Neurons
MSB 2112Mathematical BiologyLeighton Izu, UCD Pharmacology
Mon, Feb 1 2010, 3:10PMLinking Cellular Topography to Cellular Dynamics
MSB 2112Mathematical BiologyLaura Miller, University of North Carolina
Mon, Jan 25 2010, 3:10PMCombining mathematical modeling, numerical simulation, and experiment: A case study in tiny insect flight
MSB 1147Mathematical BiologyR.E. Lee Deville, University of Illinois, Urbana-Champaign
Tue, Jan 12 2010, 4:10PMSynchrony-breaking and Rare Events in Stochastic Neuronal Networks
MSB 2112Mathematical BiologyDimitry Fisher, UC Davis, Center for Neuroscience
Mon, Nov 23 2009, 3:10PMRealistic modeling of recurrent interactions in a short-term memory network
MSB 2112Mathematical BiologyAaron Fogelson, University of Utah
Mon, Nov 16 2009, 3:10PMMathematical Approaches to Three Problems in Vascular Biology Related to Intravascular Blood Clotting
MSB 2112Mathematical BiologyJie Zhu, UC Davis
Mon, Nov 9 2009, 3:10PMMesoscopic Model of Actin-based Propulsions
MSB 2112Mathematical BiologyPepe Puglisi, UCD Pharmacology
Mon, Oct 19 2009, 3:10PMModeling Excitation-Contraction Coupling in a Rabbit Ventricular Myocyte
MSB 1147Mathematical BiologyErnest Barreto, George Mason University, Department of Physics & Astronomy and The Krasnow Insti
Thu, Oct 8 2009, 12:00PMIon Concentration Dynamics and Neuronal Excitability; Synchronization in Interacting Populations of Oscillators
MSB 1147Mathematical BiologySaleet Jafri, George Mason University
Tue, Jun 2 2009, 12:10PMAdvances in the Computational Modeling of Contraction in the Heart
MSB 1147Mathematical BiologyBard Ermentrout, University of Pittsburgh
Wed, May 27 2009, 3:10PMA coupla ducks: slow currents, canards, clustering, and weak coupling
MSB 1147Mathematical BiologyWilliam Ristenpart, UC Davis (Depts of Chem Eng & Food Sciences)
Tue, May 19 2009, 12:10PMElectrohydrodynamics and Epitrochoids: Dynamic Pattern Formation of Vesicles near Electrodes
MSB 1147Mathematical BiologyKilian Koepsell, UC Berkeley
Tue, May 12 2009, 12:10PMPhase coupling estimation in coupled oscillator systems
MSB 1147Mathematical BiologyLisa Fauci, Tulane University
Sat, May 9 2009, 9:00AMUnderstanding swimming at low Reynolds numbers: successes and challenges
MSB 1147Mathematical BiologyJim Keener, University of Utah
Fri, May 8 2009, 4:15PMHow cells make measurements
MSB 1147Mathematical BiologyGraham Coop, UC Davis (Evolution and Ecology )
Tue, Apr 28 2009, 12:10PMA new method to identify loci underlying local adaptation
MSB 1147Mathematical BiologyEva Strawbridge, UC Davis
Tue, Apr 14 2009, 12:10PMMechanics, Dynamics, and Structures of DNA
MSB 1147Mathematical BiologyBard Ermentrout, University of Pittsburgh
Wed, Mar 11 2009, 3:10PMCANCELED DUE TO ILLNESS (A coupla ducks: slow currents, canards, clustering, and weak coupling)
MSB 2112Mathematical BiologySukbin Lim, Courant Institute of Mathematical Sciences, New York University
Thu, Feb 19 2009, 11:00AMNoise-induced transitions in slow wave neuronal dynamics
MSB 2112Mathematical BiologyJim Sanchirico, UC Davis (Environmental Science and Policy, GGAM)
Tue, Feb 3 2009, 11:00AM Economically Optimal Management of a Metapopulation
MSB 2112Mathematical BiologyWanda Strychalski, University of North Carolina
Thu, Jan 29 2009, 11:00AMA Numerical Method to Investigate the Effects of Changing Cell Morphologies on Biochemical Signaling Networks
MSB 2112Mathematical BiologyAnael Verdugo, Cornell University
Thu, Jan 15 2009, 11:00AMDynamics of a Gene Network Model with Time Delay
MSB 1147Mathematical BiologyEd Munro, University of Washington
Fri, Jan 9 2009, 12:00PMUsing agent-based models to explore the dynamics of cellular morphogenesis
MSB 2112Mathematical BiologyKevin Lin, University of Arizona
Tue, Jan 6 2009, 11:00AMReliability of Layered Neural Oscillator Networks
MSB 2112Mathematical BiologyEric Cytrynbaum, University of British Columbia
Tue, Nov 25 2008, 12:00PMForce generation in bacterial cell division
MSB 2112Mathematical BiologyUtz-Uwe Haus, Universität Magdeburg,
Mon, Nov 24 2008, 3:10PMComputing knock out strategies in metabolic networks
MSB 2112Mathematical BiologyLeonor Saiz, Biomedical Engineering, UC Davis
Tue, Nov 4 2008, 12:00AMModeling of biological networks
MSB 2112Mathematical BiologyTom Michoel, VIB, Ghent University
Thu, Oct 23 2008, 12:00PMIdentification of modules in biological networks
MSB 2112Mathematical BiologyCharles Wolgemuth, University of Connecticut Health Center
Tue, Oct 21 2008, 12:00PMThe Shape and Dynamics of the Spirochetes
MSB 2112Mathematical BiologyRichard Gomulkiewicz, Washington State University
Tue, Oct 7 2008, 12:00PMNeutral Evolution of Multivariate Quantitative Traits
MSB 2112Mathematical BiologySteve Mielke, Genome Center, UC Davis
Mon, Jun 2 2008, 4:10PMBrownian Dynamics of Superhelical DNA
MSB 2112Mathematical BiologyPatrice Koehl, Computer Science Dept., UC Davis
Mon, May 19 2008, 4:10PMElectrostatics for Biomolecules: Beyond Poisson-Boltzmann
MSB 2112Mathematical BiologyEric Cytrynbaum, Mathematics Dept, Univ of British Columbia
Mon, May 12 2008, 4:10PMModeling the Appearance of Oriented Arrays of Microtubules in Growing Plant Cells
MSB 2112Mathematical BiologyMont Hubbard, Sports Biomechanics Lab, UC Davis
Mon, Apr 21 2008, 4:10PMSafe Ski Jump Landing Slope Design
MSB 2112Mathematical BiologyEmily Stone, Math Dept., University of Montana
Mon, Apr 7 2008, 4:10PMDetecting spill-over: A dynamical systems modeling approach to glutamatergic synaptic signaling
MSB 2112Mathematical BiologySubhadip Raychaudhuri, UC Davis
Mon, Mar 10 2008, 2:10PMSimplified models of receptor-ligand binding and intracellular signaling systems
MSB 2112Mathematical BiologyMark Goldman, UC Davis
Mon, Feb 25 2008, 2:10PMMemory without feedback or attractors in a neural integrator network
MSB 2112Mathematical BiologyBori Mazzag, Humboldt State University
Mon, Feb 11 2008, 2:10PMA computational investigation of the localized calcium dynamics near a heterogeneous release site
MSB 2112Mathematical BiologyNick Cogan, Florida State University
Mon, Jan 28 2008, 2:10PMExtending Boundary Integral Methods to Biofilm Dynamics
MSB 2112Mathematical BiologyRyusuke Kon, UC Davis
Mon, Jan 14 2008, 2:10PMPeriodic lottery competition models and competitive exclusion
MSB 2112Mathematical BiologyTim Lewis, Math, UCD
Mon, May 21 2007, 4:10PMPhase-locking in electrically coupled networks of cortical neurons
MSB 3106Mathematical BiologySoichiro Yamada, Department of Biomedical Engineering, UCD
Mon, May 14 2007, 4:10PMSelf-organization of a microtubule network at the cell cortex: experiments and models
MSB 3106Mathematical BiologyAbdul Barakat, Engineering, UCD
Mon, May 7 2007, 4:10PMVascular Endothelial Cell Responsiveness to Fluid Mechanical Forces - Mechanisms and Implications
MSB 3106Mathematical BiologyPeter Røgen, Department of Mathematics, Technical University of Denmark
Mon, Apr 30 2007, 4:10PMDescription and classification of protein structures
MSB 3106Mathematical BiologyAlex Mogilner, NPB and Math, UCD
Mon, Apr 9 2007, 4:10PMModeling symmetry breaking in actin networks
MSB 3106Mathematical BiologyDr. James Crutchfield, Center for Computational Sciences and Engineering
Mon, Mar 12 2007, 4:10PMObjects that Make Objects: The Population Dynamics of Structural Complexity
MSB 3106Mathematical BiologyJochen Ditterich, Neurosciences Center, UCD
Mon, Dec 4 2006, 4:10PMNeural and Computational Mechanisms of Decision Making
MSB 3106Mathematical BiologyArpy and Miranda, Math Department, UCD
Mon, Nov 27 2006, 4:10PMStudent Presentations
MSB 3106Mathematical BiologyNiels Jensen, Dept of Applied Science, UCD
Mon, Nov 20 2006, 4:10PMTBA
MSB 3106Mathematical BiologyAlan Hastings, Dept of Environmental Science, UCD
Mon, Nov 13 2006, 4:10PMMathematical Issues in Persistence in Population Biology
MSB 3106Mathematical BiologySteve Mielke, UC Davis Genome Center
Mon, Nov 6 2006, 4:10PMDNA Mechanics and Dynamics
MSB 3106Mathematical BiologyRichard Plant, Dept of Plant Science, UCD
Mon, Oct 30 2006, 4:10PMSpatial and Geostatistical Analysis of Agricultural Data
MSB 3106Mathematical BiologyYun Song, Dept of Computer Science, UCD
Mon, Oct 23 2006, 4:10PMAn Algebraic Approach to a Classical Problem in Population Genetics
MSB 3106Mathematical BiologyBruce Rannala, Dept of Evolution and Ecology
Mon, Oct 16 2006, 4:10PMInferring Speciation Times Under an Episodic Molecular Clock
MSB 1147Mathematical BiologyR.E. Lee Deville, Courant Institute of Mathematical Sciences
Fri, Apr 14 2006, 4:10PMCoherence in stochastic dynamical systems
Kerr 693Mathematical BiologyKilian Koepsell, Redwood Neuroscience Institute, UC Berkeley
Thu, Nov 3 2005, 4:10PMTemporal coding in the early visual system: Does spike timing matter?
Kerr 693Mathematical BiologyBrian Mulloney, NPB, UC Davis
Thu, Oct 27 2005, 4:10PMBursts of information: oscillations, coupled oscillators, and coordinated locomotion
MSB 2112Mathematical BiologySebastian Schreiber, UC Davis Ecology
Wed, Dec 31 1969, 3:10PMTBA